Neema Jamshidi, MD, PhD

Selected publications of interest:

1. Jamshidi N, Margolis DJ, Raman S, Huang J, Reiter RE, Kuo MD. Multiregional Radiogenomic Assessment of Prostate Microenvironments with Multiparametric MR Imaging and DNA Whole-Exome Sequencing of Prostate Glands with Adenocarcinoma. Radiology. 2017 Apr 28:162827. PMID: 28453432
2. Jamshidi N, Huang D, Abtin FG, Loh CT, Kee ST, Suh RD, Yamamoto S, Das K, Dry S, Binder S, Enzmann DR, Kuo MD. Genomic Adequacy from Solid Tumor Core Needle Biopsies of ex Vivo Tissue and in Vivo Lung Masses: Prospective Study. Radiology. 2017 Mar;282(3):903-912. PMID: 27755912
3. Bordbar A, McCloskey D, Zielinski DC, Sonnenschein N, *Jamshidi N, Palsson BØ. Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics. Cell Systems. 2015 Oct 28;1(4):283-92. PMID 27136057
4. Jamshidi N, Jonasch E, Zapala M, Korn RL, Aganovic L, Zhao H, Tumkur Sitaram R, Tibshirani RJ, Banerjee S, Brooks JD, Ljungberg B, Kuo MD. The Radiogenomic Risk Score: Construction of a Prognostic Quantitative, Noninvasive Image-based Molecular Assay for Renal Cell Carcinoma. Radiology. 2015 Oct;277(1):114-23. 2015 Aug 19. PMID 26402495
5. Thomas A, Rahmanian S, Bordbar A, Palsson BØ, *Jamshidi N. Network reconstruction of platelet metabolism identifies metabolic signature for aspirin resistance. Nature Scientific Reports. 2014;4:3925. PMID 24473230.
6. Jamshidi N, Diehn M, Bredel M, Kuo MD. Illuminating Radiogenomic Characteristics of Glioblastoma Multiforme through Integration of MR Imaging, Messenger RNA Expression, and DNA Copy Number Variation. Radiology 2013 Sep 20. PMID 24056404.
7. Ahn SY, Jamshidi N, Mo ML, Wu W, Eraly SA, Dnyanmote A, Bush KT, Gallegos TF, Sweet DH, Palsson BØ, and Nigam SK. Linkage of organic anion transporter-1 to metabolic pathways through integrated "omics"-driven network and functional analysis. Journal of Biological Chemistry. 2011; 286(36):31522-31. PMID 21757732
8. Bordbar A, Lewis NE, Schellenberger J, Palsson BØ, *Jamshidi N. Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions. Molecular Systems Biology. 2010 Oct 19; 6:422. PMID 20959820
9. Jamshidi N, Palsson BØ. Flux-concentration duality in dynamic nonequilibrium biological networks. Biophysical Journal. 2009; 97(5):L11-3. PMID 19720010
10. Jamshidi N, Palsson BØ. Using In Silico Models to Simulate Dual Perturbation Experiments: Procedure Development and Interpretation of Outcomes. BMC Systems Biology. 2009 Apr 30;3:44. PMID 19405968
11. Jamshidi N, Palsson BØ. Formulating genome-scale kinetic models in the post-genome era. Molecular Systems Biology, 2008;4:171. PMID 18319723
12. Jamshidi, N and Palsson BØ. Systems biology of SNPs. Molecular Systems Biology, 2006. 2:38. PMID 16820779
13. Jamshidi N, Wiback SJ, Palsson BØ. In silico model-driven assessment of the effects of single nucleotide polymorphisms (SNPs) on human red blood cell metabolism. Genome Research, 2002. 12(11):1687-92. PMID 12421755

List of published work in PubMed >

• radiology.ucla.edu/ir
• radiology.ucla.edu/our-expert-team