GenomicsDB is the central repository for de-identified genomic and genetic data from consented patients in AWS. GenomicsDB serves as part of a platform for big data integration of genetic, genomic, and de-identified records from patient Electronic Health Record (EHR) which is available to approved UCLA researchers and collaborators.  For data and sample requests, complete this short request form.

GenomicsDB currently provides two query paths:

  • Scientific notebook – Zeppelin using Scala
  • i2b2 plug-in – returns a cohort selection count based on genotype filter